4WVZ Crystal structure of artificial crosslinked thiol dioxygenase G95C variant from Pseudomonas aeruginosa date
authors Fellner, M., Tchesnokov, E.P., Jameson, G.N.L., Wilbanks, S.M.
compound source
symmetry
R_factor
R_Free 0.2185
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.09
ligand FE2 enzyme
Gene Q034
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceSubstrate and pH-Dependent Kinetic Profile of 3-Mercaptopropionate Dioxygenase from Pseudomonas aeruginosa., Fellner M, Aloi S, Tchesnokov EP, Wilbanks SM, Jameson GN, Biochemistry. 2016 Feb 25. PMID:26878277
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]
  • Biological Unit Coordinates (4wvz.pdb1.gz) 38 Kb
  • Biological Unit Coordinates (4wvz.pdb2.gz) 36 Kb
  • Biological Unit Coordinates (4wvz.pdb3.gz) 38 Kb
  • Biological Unit Coordinates (4wvz.pdb4.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 4WVZ
  • CSU: Contacts of Structural Units for 4WVZ
  • Structure Factors (2668 Kb)
  • Retrieve 4WVZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WVZ from S2C, [Save to disk]
  • Re-refined 4wvz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WVZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WVZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wvz_A] [4wvz_B] [4wvz_D] [4wvz] [4wvz_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4WVZ
  • Community annotation for 4WVZ at PDBWiki (http://pdbwiki.org)

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