OCA Atlas for 4WYM

4WYM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
I, J, C, D, B, H, G, K, E, F, A, L

Primary reference

Structural basis of HIV-1 capsid recognition by PF74 and CPSF6., Bhattacharya A, Alam SL, Fricke T, Zadrozny K, Sedzicki J, Taylor AB, Demeler B, Pornillos O, Ganser-Pornillos BK, Diaz-Griffero F, Ivanov DN, Yeager M, Proc Natl Acad Sci U S A. 2014 Dec 17. pii: 201419945. PMID:25518861

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (422 Kb) [Save to disk]

Biological Unit Coordinates (4wym.pdb1.gz) 212 Kb

Biological Unit Coordinates (4wym.pdb2.gz) 209 Kb

CSU: Contacts of Structural Units for 4WYM

Structure Factors (2204 Kb)

Retrieve 4WYM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4WYM from S2C, [Save to disk]

Re-refined 4wym structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4WYM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4wym] [4wym_A] [4wym_B] [4wym_C] [4wym_D] [4wym_E] [4wym_F] [4wym_G] [4wym_H] [4wym_I] [4wym_J] [4wym_K] [4wym_L] [4wym_M] [4wym_N] [4wym_O] [4wym_P] [4wym_Q] [4wym_R] [4wym_S] [4wym_T] [4wym_U] [4wym_V] [4wym_W]

SWISS-PROT database:

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