4WYO Crystal structure of human-yeast chimera acetyl coA carboxylase CT domain bound to Compound 1 date
authors Vajdos, F.F.
compound source
symmetry
R_factor
R_Free 0.2070
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.89
ligand 3W2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, B


Primary referenceDecreasing the Rate of Metabolic Ketone Reduction in the Discovery of a Clinical Acetyl-CoA Carboxylase Inhibitor for the Treatment of Diabetes., Griffith DA, Kung DW, Esler WP, Amor PA, Bagley SW, Beysen C, Carvajal-Gonzalez S, Doran SD, Limberakis C, Mathiowetz AM, McPherson RK, Price DA, Ravussin E, Sonnenberg GE, Southers JA, Sweet LJ, Turner SM, Vajdos FF, J Med Chem. 2014 Nov 25. PMID:25423286
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (487 Kb) [Save to disk]
  • Biological Unit Coordinates (4wyo.pdb1.gz) 480 Kb
  • LPC: Ligand-Protein Contacts for 4WYO
  • CSU: Contacts of Structural Units for 4WYO
  • Structure Factors (1222 Kb)
  • Retrieve 4WYO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WYO from S2C, [Save to disk]
  • Re-refined 4wyo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WYO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WYO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WYO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wyo_B] [4wyo] [4wyo_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4WYO
  • Community annotation for 4WYO at PDBWiki (http://pdbwiki.org)

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