4XBQ Crystal Structure of Human Galectin-7 in Complex with Type 1 N-acetyllactosamine date
authors Hsieh, T.J., Lin, H.Y., Lin, C.H.
compound source
symmetry
R_factor
R_Free 0.2245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.23
ligand GAL, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Basis Underlying the Binding Preference of Human Galectins-1, -3 and -7 for Galbeta1-3/4GlcNAc., Hsieh TJ, Lin HY, Tu Z, Huang BS, Wu SC, Lin CH, PLoS One. 2015 May 6;10(5):e0125946. doi: 10.1371/journal.pone.0125946., eCollection 2015. PMID:25945972
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (4xbq.pdb1.gz) 23 Kb
  • Biological Unit Coordinates (4xbq.pdb2.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 4XBQ
  • CSU: Contacts of Structural Units for 4XBQ
  • Structure Factors (107 Kb)
  • Retrieve 4XBQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XBQ from S2C, [Save to disk]
  • Re-refined 4xbq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XBQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XBQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XBQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xbq] [4xbq_B] [4xbq_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4XBQ: [GLECT] [Gal-bind_lectin ] by SMART
  • Other resources with information on 4XBQ
  • Community annotation for 4XBQ at PDBWiki (http://pdbwiki.org)

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