4XDO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, FE, OGA, PG4, PGE, ZN enzyme
Primary referenceA High-Throughput Mass Spectrometry Assay Coupled with Redox Activity Testing Reduces Artifacts and False Positives in Lysine Demethylase Screening., Wigle TJ, Swinger KK, Campbell JE, Scholle MD, Sherrill J, Admirand EA, Boriack-Sjodin PA, Kuntz KW, Chesworth R, Moyer MP, Scott MP, Copeland RA, J Biomol Screen. 2015 Mar 9. pii: 1087057115575689. PMID:25755264
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (4xdo.pdb1.gz) 63 Kb
  • Biological Unit Coordinates (4xdo.pdb2.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 4XDO
  • CSU: Contacts of Structural Units for 4XDO
  • Structure Factors (1061 Kb)
  • Retrieve 4XDO in mmCIF format [Save to disk]
  • Re-refined 4xdo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4XDO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xdo] [4xdo_A] [4xdo_B]
  • SWISS-PROT database:
  • Domains found in 4XDO: [JmjC] [JmjN ] by SMART

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