4XDX The crystal structure of soluble human interleukin 8 expressed in Pichia pastoris date
authors Ostrov, D.A., Pompeu, Y.A., Jakoncic, J.J.
compound source
symmetry
R_factor
R_Free 0.1356
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 0.95
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (4xdx.pdb1.gz) 47 Kb
  • CSU: Contacts of Structural Units for 4XDX
  • Structure Factors (465 Kb)
  • Retrieve 4XDX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XDX from S2C, [Save to disk]
  • Re-refined 4xdx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XDX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XDX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xdx] [4xdx_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4XDX: [SCY ] by SMART
  • Other resources with information on 4XDX
  • Community annotation for 4XDX at PDBWiki (http://pdbwiki.org)

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