4XKX Crystal structure of BACE1 in complex with 2-aminooxazoline 3-azaxanthene inhibitor 28 date
authors Whittington, D.A., Long, A.M.
compound source
symmetry
R_factor
R_Free 0.2281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand 43K, GOL, IOD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDevelopment of 2-aminooxazoline 3-azaxanthenes as orally efficacious beta-secretase inhibitors for the potential treatment of Alzheimer's disease., Chen JJ, Liu Q, Yuan C, Gore V, Lopez P, Ma V, Amegadzie A, Qian W, Judd TC, Minatti AE, Brown J, Cheng Y, Xue M, Zhong W, Dineen TA, Epstein O, Human J, Kreiman C, Marx I, Weiss MM, Hitchcock SA, Powers TS, Chen K, Wen PH, Whittington DA, Cheng AC, Bartberger MD, Hickman D, Werner JA, Vargas HM, Everds NE, Vonderfecht SL, Dunn RT 2nd, Wood S, Fremeau RT Jr, White RD, Patel VF, Bioorg Med Chem Lett. 2015 Feb 15;25(4):767-74. doi: 10.1016/j.bmcl.2014.12.092. , Epub 2015 Jan 8. PMID:25613679
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (4xkx.pdb1.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 4XKX
  • CSU: Contacts of Structural Units for 4XKX
  • Structure Factors (1229 Kb)
  • Retrieve 4XKX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XKX from S2C, [Save to disk]
  • Re-refined 4xkx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XKX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XKX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XKX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xkx_A] [4xkx]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4XKX
  • Community annotation for 4XKX at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science