4Y17		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	LAE	enzyme
Gene Ontology	Chain Function Process Component B, C, A
Primary reference	Structural and Mechanistic Roles of Novel Chemical Ligands on the SdiA Quorum-Sensing Transcription Regulator., Nguyen Y, Nguyen NX, Rogers JL, Liao J, MacMillan JB, Jiang Y, Sperandio V, MBio. 2015 Mar 31;6(2). pii: e02429-14. doi: 10.1128/mBio.02429-14. PMID:25827420

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (230 Kb) [Save to disk] Biological Unit Coordinates (4y17.pdb1.gz) 152 Kb Biological Unit Coordinates (4y17.pdb2.gz) 150 Kb LPC: Ligand-Protein Contacts for 4Y17 CSU: Contacts of Structural Units for 4Y17 Structure Factors (213 Kb) Retrieve 4Y17 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4Y17 from S2C, [Save to disk] Re-refined 4y17 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Y17 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4y17] [4y17_A] [4y17_B] [4y17_C] SWISS-PROT database: Domain found in 4Y17: [HTH_LUXR ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---