4Y1S date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
Primary referenceStructural Basis for Ca2+-mediated Interaction of the Perforin C2 Domain with Lipid Membranes., Yagi H, Conroy PJ, Leung EW, Law RH, Trapani JA, Voskoboinik I, Whisstock JC, Norton RS, J Biol Chem. 2015 Aug 25. pii: jbc.M115.668384. PMID:26306037
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (4y1s.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 4Y1S
  • CSU: Contacts of Structural Units for 4Y1S
  • Structure Factors (818 Kb)
  • Retrieve 4Y1S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y1S from S2C, [Save to disk]
  • Re-refined 4y1s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Y1S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y1s] [4y1s_A]
  • SWISS-PROT database:
  • Domain found in 4Y1S: [C2 ] by SMART

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