4Y40 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceA unique serpin P1' glutamate and a conserved beta-sheet C arginine are key residues for activity, protease recognition and stability of serpinA12 (vaspin)., Ulbricht D, Pippel J, Schultz S, Meier R, Strater N, Heiker JT, Biochem J. 2015 Jul 21. pii: BJ20150643. PMID:26199422
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (261 Kb) [Save to disk]
  • Biological Unit Coordinates (4y40.pdb1.gz) 130 Kb
  • Biological Unit Coordinates (4y40.pdb2.gz) 127 Kb
  • LPC: Ligand-Protein Contacts for 4Y40
  • CSU: Contacts of Structural Units for 4Y40
  • Structure Factors (3309 Kb)
  • Retrieve 4Y40 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y40 from S2C, [Save to disk]
  • Re-refined 4y40 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4Y40 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y40] [4y40_A] [4y40_B]
  • SWISS-PROT database:
  • Domain found in 4Y40: [SERPIN ] by SMART

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