4Y5O CCM2 HHD in complex with MEKK3 NPB1 date
authors Fisher, O.S., Boggon, T.J.
compound source
symmetry
R_factor
R_Free 0.2323
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.35
Primary referenceStructure and vascular function of MEKK3-cerebral cavernous malformations 2 complex., Fisher OS, Deng H, Liu D, Zhang Y, Wei R, Deng Y, Zhang F, Louvi A, Turk BE, Boggon TJ, Su B, Nat Commun. 2015 Aug 3;6:7937. doi: 10.1038/ncomms8937. PMID:26235885
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (4y5o.pdb1.gz) 62 Kb
  • CSU: Contacts of Structural Units for 4Y5O
  • Structure Factors (166 Kb)
  • Retrieve 4Y5O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y5O from S2C, [Save to disk]
  • Re-refined 4y5o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4Y5O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4Y5O
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y5o] [4y5o_A] [4y5o_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4Y5O: [PB1 ] by SMART
    • Other resources with information on 4Y5O
  • Community annotation for 4Y5O at PDBWiki (http://pdbwiki.org)

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