4Y5Y date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, MLY enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, C


Primary referenceTuning Cytokine Receptor Signaling by Re-orienting Dimer Geometry with Surrogate Ligands., Moraga I, Wernig G, Wilmes S, Gryshkova V, Richter CP, Hong WJ, Sinha R, Guo F, Fabionar H, Wehrman TS, Krutzik P, Demharter S, Plo I, Weissman IL, Minary P, Majeti R, Constantinescu SN, Piehler J, Garcia KC, Cell. 2015 Mar 12;160(6):1196-208. doi: 10.1016/j.cell.2015.02.011. Epub 2015 Feb, 26. PMID:25728669
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (274 Kb) [Save to disk]
  • Biological Unit Coordinates (4y5y.pdb1.gz) 267 Kb
  • LPC: Ligand-Protein Contacts for 4Y5Y
  • CSU: Contacts of Structural Units for 4Y5Y
  • Structure Factors (439 Kb)
  • Retrieve 4Y5Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y5Y from S2C, [Save to disk]
  • Re-refined 4y5y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Y5Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y5y] [4y5y_A] [4y5y_B] [4y5y_C] [4y5y_D] [4y5y_E] [4y5y_F]
  • SWISS-PROT database:
  • Domains found in 4Y5Y: [FN3] [IGv ] by SMART

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