4Y82		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACE, CL, MES, MG, POL, TYE	enzyme
Gene Ontology	Chain Function Process Component G, U proteasome core complex, alp... I, W endopeptidase activator acti... proteasome core complex, bet... J, X endopeptidase activator acti... proteasome core complex, bet... L, Z M, a proteasome core complex, bet... N, b proteasome core complex, bet... O, A proteasome core complex, alp... P, B proteasome core complex, alp... Q, C R, D proteasome core complex, alp... S, E proteasome core complex, alp... T, F proteasome core complex, alp... V, H, Y, K
Primary reference	Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors., Huber EM, de Bruin G, Heinemeyer W, Paniagua Soriano G, Overkleeft HS, Groll M, J Am Chem Soc. 2015 Jun 11. PMID:26020686

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2042 Kb) [Save to disk] Biological Unit Coordinates (4y82.pdb1.gz) 2027 Kb LPC: Ligand-Protein Contacts for 4Y82 CSU: Contacts of Structural Units for 4Y82 Structure Factors (4787 Kb) Retrieve 4Y82 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4Y82 from S2C, [Save to disk] Re-refined 4y82 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Y82 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4y82_S] [4y82_T] [4y82_U] [4y82_V] [4y82_W] [4y82_X] [4y82] [4y82_A] [4y82_B] [4y82_C] [4y82_D] [4y82_E] [4y82_F] [4y82_G] [4y82_H] [4y82_I] [4y82_J] [4y82_K] [4y82_L] [4y82_M] [4y82_N] [4y82_O] [4y82_P] [4y82_Q] [4y82_R] [4y82_Y] [4y82_Z] [4y82_a] [4y82_b] [4y82_c] [4y82_d] [4y82_e] [4y82_f] [4y82_g] [4y82_h] SWISS-PROT database: Domain found in 4Y82: [Proteasome_A_N ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---