4Y9H	The 1.43 angstrom crystal structure of bacteriorhodopsin crystallized from bicelles	date
authors	Saiki, H., Sugiyama, S., Kakinouchi, K., Kawatake, S., Hanashima, S., Matsumori, N., Murata, M.
compound		source
symmetry		R_factor R_Free 0.22102
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.43
ligand	D10, D12, DD9, HP6, PO4, R16, RET	enzyme
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (4y9h.pdb1.gz) 42 Kb LPC: Ligand-Protein Contacts for 4Y9H CSU: Contacts of Structural Units for 4Y9H Structure Factors (1005 Kb) Retrieve 4Y9H in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4Y9H from S2C, [Save to disk] Re-refined 4y9h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Y9H in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4Y9H

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4y9h_A] [4y9h] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4Y9H: [Bac_rhodopsin ] by SMART

Other resources with information on 4Y9H

Community annotation for 4Y9H at PDBWiki (http://pdbwiki.org)

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