4YA8 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 49W, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, B, C, A


Primary referenceStructures of plasmepsin II from Plasmodium falciparum in complex with two hydroxyethylamine-based inhibitors., Recacha R, Leitans J, Akopjana I, Aprupe L, Trapencieris P, Jaudzems K, Jirgensons A, Tars K, Acta Crystallogr F Struct Biol Commun. 2015 Dec 1;71(Pt 12):1531-9. doi:, 10.1107/S2053230X15022049. Epub 2015 Nov 27. PMID:26625296
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (450 Kb) [Save to disk]
  • Biological Unit Coordinates (4ya8.pdb1.gz) 113 Kb
  • Biological Unit Coordinates (4ya8.pdb2.gz) 114 Kb
  • Biological Unit Coordinates (4ya8.pdb3.gz) 113 Kb
  • Biological Unit Coordinates (4ya8.pdb4.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 4YA8
  • CSU: Contacts of Structural Units for 4YA8
  • Structure Factors (306 Kb)
  • Retrieve 4YA8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YA8 from S2C, [Save to disk]
  • Re-refined 4ya8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YA8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ya8] [4ya8_A] [4ya8_B] [4ya8_C] [4ya8_D]
  • SWISS-PROT database:

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