4YA9		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACE, ASJ, CL, K, MES, MG, POL	enzyme
Gene Ontology	Chain Function Process Component C, Q E, S proteasome core complex, alp... G, U proteasome core complex, alp... I, W endopeptidase activator acti... proteasome core complex, bet... J, X endopeptidase activator acti... proteasome core complex, bet... M, a proteasome core complex, bet... N, b proteasome core complex, bet... O, A proteasome core complex, alp... P, B proteasome core complex, alp... R, D proteasome core complex, alp... T, F proteasome core complex, alp... V, Y, H, K Z, L
Primary reference	Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors., Huber EM, de Bruin G, Heinemeyer W, Paniagua Soriano G, Overkleeft HS, Groll M, J Am Chem Soc. 2015 Jun 11. PMID:26020686

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2058 Kb) [Save to disk] Biological Unit Coordinates (4ya9.pdb1.gz) 2043 Kb LPC: Ligand-Protein Contacts for 4YA9 CSU: Contacts of Structural Units for 4YA9 Structure Factors (5174 Kb) Retrieve 4YA9 in mmCIF format [Save to disk] Re-refined 4ya9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YA9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ya9] [4ya9_A] [4ya9_B] [4ya9_C] [4ya9_D] [4ya9_E] [4ya9_F] [4ya9_G] [4ya9_H] [4ya9_I] [4ya9_J] [4ya9_K] [4ya9_L] [4ya9_M] [4ya9_N] [4ya9_O] [4ya9_P] [4ya9_Q] [4ya9_R] [4ya9_S] [4ya9_T] [4ya9_U] [4ya9_V] [4ya9_W] [4ya9_X] [4ya9_Y] [4ya9_Z] [4ya9_a] [4ya9_b] [4ya9_c] [4ya9_d] [4ya9_e] [4ya9_f] [4ya9_g] [4ya9_h] SWISS-PROT database: Domain found in 4YA9: [Proteasome_A_N ] by SMART

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