4YBL		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component G, A
Primary reference	Paring Down HIV Env: Design and Crystal Structure of a Stabilized Inner Domain of HIV-1 gp120 Displaying a Major ADCC Target of the A32 Region., Tolbert WD, Gohain N, Veillette M, Chapleau JP, Orlandi C, Visciano ML, Ebadi M, DeVico AL, Fouts TR, Finzi A, Lewis GK, Pazgier M, Structure. 2016 May 3;24(5):697-709. doi: 10.1016/j.str.2016.03.005. Epub 2016, Mar 31. PMID:27041594

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (364 Kb) [Save to disk] Biological Unit Coordinates (4ybl.pdb1.gz) 179 Kb Biological Unit Coordinates (4ybl.pdb2.gz) 182 Kb CSU: Contacts of Structural Units for 4YBL Structure Factors (599 Kb) Retrieve 4YBL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4YBL from S2C, [Save to disk] Re-refined 4ybl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YBL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ybl] [4ybl_A] [4ybl_B] [4ybl_C] [4ybl_G] [4ybl_H] [4ybl_L] SWISS-PROT database: Domains found in 4YBL: [IG_like] [IGv ] by SMART

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