4YGA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
G, E, C, A


Primary referenceAllosteric activation of apicomplexan calcium-dependent protein kinases., Ingram JR, Knockenhauer KE, Markus BM, Mandelbaum J, Ramek A, Shan Y, Shaw DE, Schwartz TU, Ploegh HL, Lourido S, Proc Natl Acad Sci U S A. 2015 Aug 24. pii: 201505914. PMID:26305940
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (751 Kb) [Save to disk]
  • Biological Unit Coordinates (4yga.pdb1.gz) 191 Kb
  • Biological Unit Coordinates (4yga.pdb2.gz) 191 Kb
  • Biological Unit Coordinates (4yga.pdb3.gz) 190 Kb
  • Biological Unit Coordinates (4yga.pdb4.gz) 189 Kb
  • LPC: Ligand-Protein Contacts for 4YGA
  • CSU: Contacts of Structural Units for 4YGA
  • Structure Factors (566 Kb)
  • Retrieve 4YGA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YGA from S2C, [Save to disk]
  • Re-refined 4yga structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YGA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yga] [4yga_A] [4yga_B] [4yga_C] [4yga_D] [4yga_E] [4yga_F] [4yga_G] [4yga_H]
  • SWISS-PROT database:
  • Domains found in 4YGA: [EFh] [IGv] [S_TKc ] by SMART

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