4YLH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand XE, YE1 enzyme
Gene BU52
Gene
Ontology
ChainFunctionProcessComponent
G, H, J, K, L, B, E, A, C, I, F, D


Primary referenceOxygen diffusion pathways in a cofactor-independent dioxygenase., Di Russo NV, Condurso HL, Li K, Bruner SD, Roitberg AE, Chem Sci. 2015 Nov 1;6(11):6341-6348. Epub 2015 Jul 23. PMID:26508997
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (816 Kb) [Save to disk]
  • Biological Unit Coordinates (4ylh.pdb1.gz) 407 Kb
  • Biological Unit Coordinates (4ylh.pdb2.gz) 407 Kb
  • LPC: Ligand-Protein Contacts for 4YLH
  • CSU: Contacts of Structural Units for 4YLH
  • Structure Factors (12784 Kb)
  • Retrieve 4YLH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YLH from S2C, [Save to disk]
  • Re-refined 4ylh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YLH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ylh] [4ylh_A] [4ylh_B] [4ylh_C] [4ylh_D] [4ylh_E] [4ylh_F] [4ylh_G] [4ylh_H] [4ylh_I] [4ylh_J] [4ylh_K] [4ylh_L]
  • SWISS-PROT database:

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