4YNQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DT, MG, TMP enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, C, B


Primary referenceExonuclease TREX1 degrades double-stranded DNA to prevent spontaneous lupus-like inflammatory disease., Grieves JL, Fye JM, Harvey S, Grayson JM, Hollis T, Perrino FW, Proc Natl Acad Sci U S A. 2015 Apr 21;112(16):5117-22. doi:, 10.1073/pnas.1423804112. Epub 2015 Apr 6. PMID:25848017
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (4ynq.pdb1.gz) 88 Kb
  • Biological Unit Coordinates (4ynq.pdb2.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 4YNQ
  • CSU: Contacts of Structural Units for 4YNQ
  • Structure Factors (574 Kb)
  • Retrieve 4YNQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YNQ from S2C, [Save to disk]
  • Re-refined 4ynq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YNQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ynq] [4ynq_A] [4ynq_B] [4ynq_C] [4ynq_D] [4ynq_E] [4ynq_F] [4ynq_G] [4ynq_H]
  • SWISS-PROT database:
  • Domain found in 4YNQ: [EXOIII ] by SMART

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