4YON P-Rex1:Rac1 complex date
authors Lucato, C.M., Whisstock, J.C., Ellisdon, A.M.
compound source
symmetry
R_factor
R_Free 0.1832
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.95
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceThe Phosphatidylinositol (3,4,5)-trisphosphate-dependent Rac Exchanger 1:Ras-related C3 Botulinum Toxin Substrate 1 (P-Rex1:Rac1) Complex Reveals the Basis of Rac1 Activation in Breast Cancer Cells., Lucato CM, Halls ML, Ooms LM, Liu HJ, Mitchell CA, Whisstock JC, Ellisdon AM, J Biol Chem. 2015 Jun 24. pii: jbc.M115.660456. PMID:26112412
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk]
  • Biological Unit Coordinates (4yon.pdb1.gz) 184 Kb
  • CSU: Contacts of Structural Units for 4YON
  • Structure Factors (625 Kb)
  • Retrieve 4YON in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YON from S2C, [Save to disk]
  • Re-refined 4yon structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YON in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4YON
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yon_A] [4yon_B] [4yon]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4YON: [PH] [RHO] [RhoGEF ] by SMART
    • Other resources with information on 4YON
  • Community annotation for 4YON at PDBWiki (http://pdbwiki.org)

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