4YPD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, DKG, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Development of Novel Chemical Probes to Address CNS Protein Kinase Involvement in Synaptic Dysfunction., Watterson DM, Grum-Tokars VL, Roy SM, Schavocky JP, Bradaric BD, Bachstetter AD, Xing B, Dimayuga E, Saeed F, Zhang H, Staniszewski A, Pelletier JC, Minasov G, Anderson WF, Arancio O, Van Eldik LJ, PLoS One. 2013 Jun 26;8(6):e66226. Print 2013. PMID:23840427

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk] Biological Unit Coordinates (4ypd.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 4YPD CSU: Contacts of Structural Units for 4YPD Structure Factors (901 Kb) Retrieve 4YPD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4YPD from S2C, [Save to disk] Re-refined 4ypd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YPD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ypd] [4ypd_A] SWISS-PROT database: Domain found in 4YPD: [S_TKc ] by SMART

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