4YPJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component B, A
Primary reference	Crystal structure of beta-galactosidase from Bacillus circulans ATCC 31382 (BgaD) and the construction of the thermophilic mutants., Ishikawa K, Kataoka M, Yanamoto T, Nakabayashi M, Watanabe M, Ishihara S, Yamaguchi S, FEBS J. 2015 Apr 16. doi: 10.1111/febs.13298. PMID:25879162

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (274 Kb) [Save to disk] Biological Unit Coordinates (4ypj.pdb1.gz) 138 Kb Biological Unit Coordinates (4ypj.pdb2.gz) 136 Kb CSU: Contacts of Structural Units for 4YPJ Structure Factors (2338 Kb) Retrieve 4YPJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4YPJ from S2C, [Save to disk] Re-refined 4ypj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YPJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ypj] [4ypj_A] [4ypj_B] SWISS-PROT database: Domain found in 4YPJ: [BID_1 ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---