OCA Atlas for 4Z4C

4Z4C

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

IPA, IPH, MG, PO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
A	core promoter sequence-speci... translation initiation facto... endoribonuclease activity endoribonuclease activity, p... siRNA binding endoribonuclease activity, c...

Primary reference

Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets., Schirle NT, Sheu-Gruttadauria J, Chandradoss SD, Joo C, MacRae IJ, Elife. 2015 Sep 11;4. doi: 10.7554/eLife.07646. PMID:26359634

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk]

Biological Unit Coordinates (4z4c.pdb1.gz) 292 Kb

LPC: Ligand-Protein Contacts for 4Z4C

CSU: Contacts of Structural Units for 4Z4C

Structure Factors (2427 Kb)

Retrieve 4Z4C in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4Z4C from S2C, [Save to disk]

Re-refined 4z4c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Z4C in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4z4c] [4z4c_A] [4z4c_B] [4z4c_D]

SWISS-PROT database:

Domains found in 4Z4C: [DUF1785] [PAZ] [Piwi ] by SMART

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