4ZB1 Crystal Structure of Blue Chromoprotein sgBP from Stichodactyla Gigantea date
authors Lee, C.C., Ching, C.Y., Tsai, H.J., Wang, A.H.J.
compound source
symmetry
R_factor
R_Free 0.21725
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.25
ligand CRQ, TOE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceChromophore Deprotonation State Alters the Optical Properties of Blue Chromoprotein., Chiang CY, Lee CC, Lo SY, Wang AH, Tsai HJ, PLoS One. 2015 Jul 28;10(7):e0134108. doi: 10.1371/journal.pone.0134108., eCollection 2015. PMID:26218063
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (4zb1.pdb1.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 4ZB1
  • CSU: Contacts of Structural Units for 4ZB1
  • Structure Factors (391 Kb)
  • Retrieve 4ZB1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZB1 from S2C, [Save to disk]
  • Re-refined 4zb1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZB1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZB1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1j4zb1, region B:2-136,B:410-526 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zb1_A] [4zb1_B] [4zb1]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZB1
  • Community annotation for 4ZB1 at PDBWiki (http://pdbwiki.org)

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