4ZBP Crystal structure of the AMPCPR-bound AtNUDT7 date
authors Tang, Q., Liu, C., Zhong, C., Ding, J.
compound source
symmetry
R_factor
R_Free 0.28978
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand ADV, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceCrystal Structures of Arabidopsis thaliana Nudix Hydrolase NUDT7 Reveal a Previously Unobserved Conformation., Tang Q, Liu C, Zhong C, Ding J, Mol Plant. 2015 Aug 4. pii: S1674-2052(15)00322-6. doi:, 10.1016/j.molp.2015.07.010. PMID:26253775
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk]
  • Biological Unit Coordinates (4zbp.pdb1.gz) 88 Kb
  • Biological Unit Coordinates (4zbp.pdb2.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 4ZBP
  • CSU: Contacts of Structural Units for 4ZBP
  • Structure Factors (451 Kb)
  • Retrieve 4ZBP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZBP from S2C, [Save to disk]
  • Re-refined 4zbp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZBP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZBP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zbp_A] [4zbp] [4zbp_C] [4zbp_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4ZBP
  • Community annotation for 4ZBP at PDBWiki (http://pdbwiki.org)

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