OCA Atlas for 4ZGJ

4ZGJ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CSD, FE

enzyme

Gene
Ontology

Chain	Function	Process	Component
J, D, N, F, B, H, P, L
M, O, A, E, C, I, K, G

Primary reference

Analyzing the catalytic role of active site residues in the Fe-type nitrile hydratase from Comamonas testosteroni Ni1., Martinez S, Wu R, Krzywda K, Opalka V, Chan H, Liu D, Holz RC, J Biol Inorg Chem. 2015 Jul;20(5):885-94. doi: 10.1007/s00775-015-1273-3. Epub, 2015 Jun 16. PMID:26077812

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1147 Kb) [Save to disk]

Biological Unit Coordinates (4zgj.pdb1.gz) 147 Kb

Biological Unit Coordinates (4zgj.pdb2.gz) 147 Kb

Biological Unit Coordinates (4zgj.pdb3.gz) 147 Kb

Biological Unit Coordinates (4zgj.pdb4.gz) 147 Kb

Biological Unit Coordinates (4zgj.pdb5.gz) 147 Kb

Biological Unit Coordinates (4zgj.pdb6.gz) 147 Kb

Biological Unit Coordinates (4zgj.pdb7.gz) 146 Kb

Biological Unit Coordinates (4zgj.pdb8.gz) 145 Kb

LPC: Ligand-Protein Contacts for 4ZGJ

CSU: Contacts of Structural Units for 4ZGJ

Structure Factors (8423 Kb)

Retrieve 4ZGJ in mmCIF format [Save to disk]

Re-refined 4zgj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ZGJ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4zgj] [4zgj_M] [4zgj_L] [4zgj_N] [4zgj_O] [4zgj_P] [4zgj_A] [4zgj_B] [4zgj_C] [4zgj_D] [4zgj_E] [4zgj_F] [4zgj_G] [4zgj_H] [4zgj_I] [4zgj_J] [4zgj_K]

SWISS-PROT database:

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