4ZIN Fluorescent Protein date Apr 28, 2015
title Genetically Encoded Phenyl Azide Photochemistry Drive Positi Negative Functional Modulation Of A Red Fluorescent Protein
authors S.C.Reddington, S.Driezis, A.M.Hartley, P.D.Watson, P.J.Rizkalla D.D.Jones
compound source
Molecule: Mcherry Fluorescent Protein
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Anaplasma Marginale
Organism_taxid: 770
Gene: Mcherry
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.206 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.280 103.430 150.720 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.67 Å
ligand 4OO, CH6, EDO, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (226 Kb) [Save to disk]
  • Biological Unit Coordinates (4zin.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (4zin.pdb2.gz) 76 Kb
  • Biological Unit Coordinates (4zin.pdb3.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 4ZIN
  • CSU: Contacts of Structural Units for 4ZIN
  • Structure Factors (4299 Kb)
  • Retrieve 4ZIN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZIN from S2C, [Save to disk]
  • Re-refined 4zin structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZIN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZIN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 4zin from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zin_C] [4zin_A] [4zin] [4zin_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZIN
  • Community annotation for 4ZIN at PDBWiki (http://pdbwiki.org)

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