4ZNF HIGH-RESOLUTION THREE-DIMENSIONAL STRUCTURE OF A SINGLE ZINC FINGER FROM A HUMAN ENHANCER BINDING PROTEIN IN SOLUTION date
authors Gronenborn, A.M., Clore, G.M., Omichinski, J.G.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 41 Modelsresolution
ligand ZN enzyme
related structures by homologous chain: 3ZNF
Primary referenceHigh-resolution three-dimensional structure of a single zinc finger from a human enhancer binding protein in solution., Omichinski JG, Clore GM, Appella E, Sakaguchi K, Gronenborn AM, Biochemistry 1990 Oct 9;29(40):9324-34. PMID:2248949
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (386 Kb) [Save to disk]
  • Biological Unit Coordinates (4znf.pdb1.gz) 10 Kb
  • LPC: Ligand-Protein Contacts for 4ZNF
  • CSU: Contacts of Structural Units for 4ZNF
  • Retrieve 4ZNF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZNF from S2C, [Save to disk]
  • View 4ZNF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZNF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ZNF, from MSDmotif at EBI
  • Genome occurence of 4ZNF's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d4znf__, region [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4znf] [4znf_A]
  • SWISS-PROT database: [P15822]
  • Domain organization of [ZEP1_HUMAN] by SWISSPFAM
  • Domain found in 4ZNF: [ZnF_C2H2 ] by SMART
  • Other resources with information on 4ZNF
  • Community annotation for 4ZNF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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