OCA Atlas for 4ZNX

4ZNX

Crystal structure of the Fyn-SH3 domain in complex with the high affinity peptide APP12

date

authors

Camara-Artigas, A.

compound

source

symmetry

R_factor

R_Free

0.2223

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

2.10

Primary reference

The role of water molecules in the binding of class I and II peptides to the SH3 domain of the Fyn tyrosine kinase., Camara-Artigas A, Ortiz-Salmeron E, Andujar-Sanchez M, Bacarizo J, Martin-Garcia JM, Acta Crystallogr F Struct Biol Commun. 2016 Sep;72(Pt 9):707-12. doi:, 10.1107/S2053230X16012310. Epub 2016 Aug 26. PMID:27599862

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]

Biological Unit Coordinates (4znx.pdb1.gz) 122 Kb

CSU: Contacts of Structural Units for 4ZNX

Structure Factors (1103 Kb)

Retrieve 4ZNX in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4ZNX from S2C, [Save to disk]

Re-refined 4znx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ZNX in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4ZNX

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4znx_B] [4znx_F] [4znx_C] [4znx_H] [4znx_E] [4znx] [4znx_G] [4znx_D] [4znx_A]

SWISS-PROT database:

Domain organization of by SWISSPFAM

Domain found in 4ZNX: [SH3 ] by SMART

Other resources with information on 4ZNX

Community annotation for 4ZNX at PDBWiki (http://pdbwiki.org)

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