4ZS9 Raffinose and panose binding protein from Bifidobacterium animalis subsp. lactis Bl-04, bound with raffinose date
authors Fredslund, F., Ejby, M., Andersen, J.M., Slotboom, D.J., Hachem, M.Abou.
compound source
symmetry
R_factor
R_Free 0.1666
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.37
ligand CL, FRU, GLA, GLC, MG enzyme
Gene BALAC
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAn ATP Binding Cassette Transporter Mediates the Uptake of alpha-(1,6)-Linked Dietary Oligosaccharides in Bifidobacterium and Correlates with Competitive Growth on These Substrates., Ejby M, Fredslund F, Andersen JM, Vujicic Zagar A, Henriksen JR, Andersen TL, Svensson B, Slotboom DJ, Abou Hachem M, J Biol Chem. 2016 Sep 16;291(38):20220-31. doi: 10.1074/jbc.M116.746529. Epub, 2016 Aug 8. PMID:27502277
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (386 Kb) [Save to disk]
  • Biological Unit Coordinates (4zs9.pdb1.gz) 190 Kb
  • Biological Unit Coordinates (4zs9.pdb2.gz) 191 Kb
  • LPC: Ligand-Protein Contacts for 4ZS9
  • CSU: Contacts of Structural Units for 4ZS9
  • Structure Factors (1578 Kb)
  • Retrieve 4ZS9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZS9 from S2C, [Save to disk]
  • Re-refined 4zs9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZS9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZS9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zs9_B] [4zs9_A] [4zs9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZS9
  • Community annotation for 4ZS9 at PDBWiki (http://pdbwiki.org)

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