4ZVS Caspase-7 Variant 1 (V1) with reprogrammed substrate specificity due to Y230A/W232M/S234N substitutions, bound to DEVD inhibitor. date
authors MacPherson, D.J., Hill, M.E., Hardy, J.A.
compound source
symmetry
R_factor
R_Free 0.2391
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand ACE, ASJ enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


Primary referenceReprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition., Hill ME, MacPherson DJ, Wu P, Julien O, Wells JA, Hardy JA, ACS Chem Biol. 2016 Mar 31. PMID:27032039
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (4zvs.pdb1.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 4ZVS
  • CSU: Contacts of Structural Units for 4ZVS
  • Structure Factors (509 Kb)
  • Retrieve 4ZVS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZVS from S2C, [Save to disk]
  • Re-refined 4zvs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZVS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZVS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zvs_C] [4zvs_E] [4zvs_A] [4zvs_F] [4zvs_B] [4zvs] [4zvs_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ZVS: [CASc ] by SMART
  • Other resources with information on 4ZVS
  • Community annotation for 4ZVS at PDBWiki (http://pdbwiki.org)

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