4ZYC Discovery of dihydroisoquinolinone derivatives as novel inhibitors of the p53-MDM2 interaction with a distinct binding mode: Hdm2 (MDM2) complexed with cpd5 date
authors Kallen, J.
compound source
symmetry
R_factor
R_Free 0.2587
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.95
ligand 4SS, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceDiscovery of dihydroisoquinolinone derivatives as novel inhibitors of the p53-MDM2 interaction with a distinct binding mode., Gessier F, Kallen J, Jacoby E, Chene P, Stachyra-Valat T, Ruetz S, Jeay S, Holzer P, Masuya K, Furet P, Bioorg Med Chem Lett. 2015 Jun 23. pii: S0960-894X(15)00651-4. doi:, 10.1016/j.bmcl.2015.06.058. PMID:26141769
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (4zyc.pdb1.gz) 18 Kb
  • Biological Unit Coordinates (4zyc.pdb2.gz) 17 Kb
  • Biological Unit Coordinates (4zyc.pdb3.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 4ZYC
  • CSU: Contacts of Structural Units for 4ZYC
  • Structure Factors (381 Kb)
  • Retrieve 4ZYC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZYC from S2C, [Save to disk]
  • Re-refined 4zyc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZYC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZYC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zyc_A] [4zyc_B] [4zyc_C] [4zyc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4ZYC
  • Community annotation for 4ZYC at PDBWiki (http://pdbwiki.org)

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