5A00	Structure of human PARP1 catalytic domain bound to an isoindolinone inhibitor	date
authors	Casale, E., Fasolini, M., Papeo, G., Posteri, H., Borghi, D., Busel, A.A., Caprera, F., Ciomei, M., Cirla, A., Corti, E., DAnello, M., Fasolini, M., Felder, E.R., Forte, B., Galvani, A., Isacchi, A., Khvat, A., Krasavin, M.Y., Lupi, R., Orsini, P., Perego, R., Pesenti, E., Pezzetta, D., Rainoldi, S., RiccardiSirtori, F., Scolaro, A., Sola, F., Zuccotto, F., Donati, D., Montagnoli, A.
compound		source
symmetry		R_factor R_Free 0.27963
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.75
ligand	D7N, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of 2-[1-(4,4-difluorocyclohexyl)piperidin-4-yl]-6-fluoro-3-oxo-2,3-dihydro-1H-isoind ole-4-carboxamide (NMS-P118): a Potent, Orally Available and Highly Selective PARP-1 Inhibitor for Cancer Therapy., Papeo GM, Posteri H, Borghi D, Busel AA, Caprera F, Casale E, Ciomei M, Cirla A, Corti E, D'Anello M, Fasolini M, Forte B, Galvani A, Isacchi A, Khvat A, Krasavin MY, Lupi R, Orsini P, Perego R, Pesenti E, Pezzetta D, Rainoldi S, Riccardi-Sirtori F, Scolaro A, Sola F, Zuccotto F, Felder ER, Donati D, Montagnoli A, J Med Chem. 2015 Jul 29. PMID:26222319

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (5a00.pdb1.gz) 57 Kb LPC: Ligand-Protein Contacts for 5A00 CSU: Contacts of Structural Units for 5A00 Structure Factors (140 Kb) Retrieve 5A00 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5A00 from S2C, [Save to disk] Re-refined 5a00 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5A00 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5A00

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5a00] [5a00_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5A00

Community annotation for 5A00 at PDBWiki (http://pdbwiki.org)

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