5A10 The crystal structure of Ta-TFP, a thiocyanate-forming protein involved in glucosinolate breakdown (space group C2) date
authors Krausze, J., Gumz, F., Wittstock, U.
compound source
symmetry
R_factor
R_Free 0.1756
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.42
ligand ACT, NA enzyme
Primary referenceThe crystal structure of the thiocyanate-forming protein from Thlaspi arvense, a kelch protein involved in glucosinolate breakdown., Gumz F, Krausze J, Eisenschmidt D, Backenkohler A, Barleben L, Brandt W, Wittstock U, Plant Mol Biol. 2015 Aug 11. PMID:26260516
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (5a10.pdb1.gz) 239 Kb
  • LPC: Ligand-Protein Contacts for 5A10
  • CSU: Contacts of Structural Units for 5A10
  • Structure Factors (617 Kb)
  • Retrieve 5A10 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A10 from S2C, [Save to disk]
  • Re-refined 5a10 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5A10 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5A10
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a10_A] [5a10]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5A10
  • Community annotation for 5A10 at PDBWiki (http://pdbwiki.org)

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