5A24	Hydrolase	date	May 12, 2015
title	Crystal Structure Of Dionain-1, The Major Endopeptidase In The Venus Flytrap Digestive Juice
authors	M.W.Risor, L.R.Thomsen, K.W.Sanggaard, T.A.Nielsen, I.B.Thogerse M.V.Lukassen, L.Rossen, I.Garcia-Ferrer, T.Guevara, E.Meinjohan N.C.Nielsen, F.X.Gomis-Ruth, J.J.Enghild
compound		source
Molecule: Dionain-1 Chain: A Fragment: Mature Enzyme Engineered: Yes		Organism_scientific: Dionaea Muscipula Organism_common: Venus Flytrap Organism_taxid: 4362 Expression_system: Komagataella Pastoris Expression_system_taxid: 4922 Expression_system_strain: Km71h Expression_system_plasmid: Ppiczalphac Other_details: From The Plant Digestive Juice
symmetry	Space Group: C 1 2 1	R_factor 0.1575 R_Free 0.1720
crystal cell	length a length b length c angle alpha angle beta angle gamma 73.850 47.790 57.790 90.00 92.44 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	E64, PO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Enzymatic and structural characterization of the major endopeptidase in the Venus flytrap digestion fluid., Risor MW, Thomsen LR, Sanggaard KW, Nielsen TA, Thogersen IB, Lukassen MV, Rossen L, Garcia-Ferrer I, Guevara T, Scavenius C, Meinjohanns E, Gomis-Ruth FX, Enghild JJ, J Biol Chem. 2015 Dec 1. pii: jbc.M115.672550. PMID:26627834

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk] Biological Unit Coordinates (5a24.pdb1.gz) 74 Kb LPC: Ligand-Protein Contacts for 5A24 CSU: Contacts of Structural Units for 5A24 Structure Factors (280 Kb) Retrieve 5A24 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5A24 from S2C, [Save to disk] Re-refined 5a24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 5A24

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 5a24 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5a24_A] [5a24] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5A24: [Pept_C1 ] by SMART

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