5A6Y		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, GOL, MAN, SO4	enzyme
Gene Ontology	Chain Function Process Component B, D, A, C
Primary reference	The virulence factor LecB varies in clinical isolates: consequences for ligand binding and drug discovery., Sommer R, Wagner S, Varrot A, Nycholat CM, Khaledi A, Haussler S, Paulson JC, Imberty A, Titz A, Chem Sci. 2016 Aug 1;7(8):4990-5001. doi: 10.1039/c6sc00696e. Epub 2016 May 11. PMID:30155149

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk] Biological Unit Coordinates (5a6y.pdb1.gz) 157 Kb LPC: Ligand-Protein Contacts for 5A6Y CSU: Contacts of Structural Units for 5A6Y Structure Factors (2233 Kb) Retrieve 5A6Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5A6Y from S2C, [Save to disk] Re-refined 5a6y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5A6Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5a6y_D] [5a6y] [5a6y_A] [5a6y_B] [5a6y_C] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---