5A80 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9CJ, EDO, MN, SO4, ZN enzyme
Primary referenceDocking and Linking of Fragments To Discover Jumonji Histone Demethylase Inhibitors., Korczynska M, Le DD, Younger N, Gregori-Puigjane E, Tumber A, Krojer T, Velupillai S, Gileadi C, Nowak RP, Iwasa E, Pollock SB, Ortiz Torres I, Oppermann U, Shoichet BK, Fujimori DG, J Med Chem. 2015 Dec 23. PMID:26699912
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (5a80.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (5a80.pdb2.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 5A80
  • CSU: Contacts of Structural Units for 5A80
  • Structure Factors (430 Kb)
  • Retrieve 5A80 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A80 from S2C, [Save to disk]
  • Re-refined 5a80 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5A80 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a80] [5a80_A] [5a80_B]
  • SWISS-PROT database:
  • Domains found in 5A80: [JmjC] [JmjN ] by SMART

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