5A8Y		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FUC, MES, MLI, NAG, VBM	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Potent and Selective Human Neutrophil Elastase Inhibitors with Novel Equatorial Ring Topology: in vivo Efficacy of the Polar Pyrimidopyridazine BAY-8040 in a Pulmonary Arterial Hypertension Rat Model., von Nussbaum F, Li VM, Meibom D, Anlauf S, Bechem M, Delbeck M, Gerisch M, Harrenga A, Karthaus D, Lang D, Lustig K, Mittendorf J, Schafer M, Schafer S, Schamberger J, ChemMedChem. 2016 Jan 19;11(2):199-206. doi: 10.1002/cmdc.201500269. Epub 2015, Sep 3. PMID:26333652

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk] Biological Unit Coordinates (5a8y.pdb1.gz) 40 Kb LPC: Ligand-Protein Contacts for 5A8Y CSU: Contacts of Structural Units for 5A8Y Structure Factors (204 Kb) Retrieve 5A8Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5A8Y from S2C, [Save to disk] Re-refined 5a8y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5A8Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5a8y] [5a8y_A] SWISS-PROT database: Domain found in 5A8Y: [Tryp_SPc ] by SMART

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