5ADX CryoEM structure of dynactin complex at 4.0 angstrom resolution date
authors Zhang, K., Urnavicius, L., Diamant, A.G., Motz, C., Schlage, M.A., Yu, M., Patel, N.A., Robinson, C.V., Carter, A.P.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.00
note 5ADX supersedes 5AFT
Gene
Ontology
ChainFunctionProcessComponent
H
  • structural constituent of po...


    • J
  • retrograde axonal transport ...

    • K


    L


    U


    b


    Primary referenceThe structure of the dynactin complex and its interaction with dynein., Urnavicius L, Zhang K, Diamant AG, Motz C, Schlager MA, Yu M, Patel NA, Robinson CV, Carter AP, Science. 2015 Mar 27;347(6229):1441-6. doi: 10.1126/science.aaa4080. Epub 2015, Feb 12. PMID:25814576
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (944 Kb) [Save to disk]
  • Biological Unit Coordinates (5adx.pdb1.gz) 934 Kb
  • CSU: Contacts of Structural Units for 5ADX
  • Retrieve 5ADX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ADX from S2C, [Save to disk]
    • View 5ADX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5ADX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5adx_E] [5adx_R] [5adx_z] [5adx_b] [5adx_d] [5adx_N] [5adx_K] [5adx_B] [5adx_D] [5adx_M] [5adx_H] [5adx_P] [5adx_A] [5adx] [5adx_Q] [5adx_I] [5adx_Z] [5adx_U] [5adx_c] [5adx_O] [5adx_V] [5adx_L] [5adx_F] [5adx_G] [5adx_Y] [5adx_a] [5adx_C] [5adx_J]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5ADX: [ACTIN ] by SMART
    • Other resources with information on 5ADX
  • Community annotation for 5ADX at PDBWiki (http://pdbwiki.org)

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