5AF4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, SO4 enzyme
Primary referenceAssembly and Specific Recognition of K29- and K33-Linked Polyubiquitin., Michel MA, Elliott PR, Swatek KN, Simicek M, Pruneda JN, Wagstaff JL, Freund SM, Komander D, Mol Cell. 2015 Mar 4. pii: S1097-2765(15)00091-X. doi:, 10.1016/j.molcel.2015.01.042. PMID:25752577
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (212 Kb) [Save to disk]
  • Biological Unit Coordinates (5af4.pdb1.gz) 53 Kb
  • Biological Unit Coordinates (5af4.pdb2.gz) 51 Kb
  • Biological Unit Coordinates (5af4.pdb3.gz) 54 Kb
  • Biological Unit Coordinates (5af4.pdb4.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 5AF4
  • CSU: Contacts of Structural Units for 5AF4
  • Structure Factors (2982 Kb)
  • Retrieve 5AF4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AF4 from S2C, [Save to disk]
  • Re-refined 5af4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5AF4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5af4] [5af4_A] [5af4_B] [5af4_C] [5af4_D] [5af4_E] [5af4_F] [5af4_G] [5af4_H]
  • SWISS-PROT database:
  • Domain found in 5AF4: [UBQ ] by SMART

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