5AFZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NA, NAG, PO4, TYS, UET enzyme
Gene
Ontology
ChainFunctionProcessComponent
H


L


Primary referenceFragment Binding Can Be Either More Enthalpy-Driven or Entropy-Driven: Crystal Structures and Residual Hydration Patterns Suggest Why., Ruhmann E, Betz M, Heine A, Klebe G, J Med Chem. 2015 Aug 24. PMID:26270568
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (5afz.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 5AFZ
  • CSU: Contacts of Structural Units for 5AFZ
  • Structure Factors (557 Kb)
  • Retrieve 5AFZ in mmCIF format [Save to disk]
  • Re-refined 5afz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5AFZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5afz] [5afz_H] [5afz_I] [5afz_L]
  • SWISS-PROT database:
  • Domain found in 5AFZ: [Tryp_SPc ] by SMART

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