5APF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Terahertz radiation induces non-thermal structural changes associated with Frohlich condensation in a protein crystal., Lundholm IV, Rodilla H, Wahlgren WY, Duelli A, Bourenkov G, Vukusic J, Friedman R, Stake J, Schneider T, Katona G, Struct Dyn. 2015 Oct 13;2(5):054702. doi: 10.1063/1.4931825. eCollection 2015, Sep. PMID:26798828

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk] Biological Unit Coordinates (5apf.pdb1.gz) 21 Kb LPC: Ligand-Protein Contacts for 5APF CSU: Contacts of Structural Units for 5APF Structure Factors (230 Kb) Retrieve 5APF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5APF from S2C, [Save to disk] Re-refined 5apf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5APF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5apf] [5apf_A] SWISS-PROT database: Domain found in 5APF: [LYZ1 ] by SMART

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