5APH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DMS, VYI enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBenzoxazepines Achieve Potent Suppression of IL-17 Release in Human T-Helper 17 (T 17) Cells through an Induced-Fit Binding Mode to the Nuclear Receptor RORgamma., Olsson RI, Xue Y, von Berg S, Aagaard A, McPheat J, Hansson EL, Bernstrom J, Hansson P, Jirholt J, Grindebacke H, Leffler A, Chen R, Xiong Y, Ge H, Hansson TG, Narjes F, ChemMedChem. 2015 Nov 10. doi: 10.1002/cmdc.201500432. PMID:26553345
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (5aph.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 5APH
  • CSU: Contacts of Structural Units for 5APH
  • Structure Factors (771 Kb)
  • Retrieve 5APH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5APH from S2C, [Save to disk]
  • Re-refined 5aph structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5APH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5aph] [5aph_A] [5aph_C]
  • SWISS-PROT database:
  • Domain found in 5APH: [HOLI ] by SMART

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