OCA Atlas for 5ARG

5ARG

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GOL, H41, SAM, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
A	histone methyltransferase ac...

Primary reference

Discovery and Characterization of a Highly Potent and Selective Aminopyrazoline-Based in Vivo Probe (BAY-598) for the Protein Lysine Methyltransferase SMYD2., Eggert E, Hillig RC, Koehr S, Stockigt D, Weiske J, Barak N, Mowat J, Brumby T, Christ CD, Ter Laak A, Lang T, Fernandez-Montalvan AE, Badock V, Weinmann H, Hartung IV, Barsyte-Lovejoy D, Szewczyk M, Kennedy S, Li F, Vedadi M, Brown PJ, Santhakumar V, Arrowsmith CH, Stellfeld T, Stresemann C, J Med Chem. 2016 May 3. PMID:27075367

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]

Biological Unit Coordinates (5arg.pdb1.gz) 147 Kb

LPC: Ligand-Protein Contacts for 5ARG

CSU: Contacts of Structural Units for 5ARG

Structure Factors (298 Kb)

Retrieve 5ARG in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5ARG from S2C, [Save to disk]

Re-refined 5arg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5ARG in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5arg] [5arg_A]

SWISS-PROT database:

Domain found in 5ARG: [SET ] by SMART

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