5B1B date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CDL, CHD, CU, CUA, DMU, EDO, FME, HEA, MG, NA, PEK, PGV, PO4, PSC, SAC, TGL, TPO, UNX, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, N


C, P
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


  • E, R


    F, S


    G, T


    H, U


    K, X


    M, Z


    O, B
  • cytochrome-c oxidase activit...


  • Q, D


    V, I
  • cytochrome-c oxidase activit...


  • W, J


    Y, L


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1283 Kb) [Save to disk]
  • Biological Unit Coordinates (5b1b.pdb1.gz) 632 Kb
  • Biological Unit Coordinates (5b1b.pdb2.gz) 636 Kb
  • LPC: Ligand-Protein Contacts for 5B1B
  • CSU: Contacts of Structural Units for 5B1B
  • Structure Factors (9931 Kb)
  • Retrieve 5B1B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5B1B from S2C, [Save to disk]
  • Re-refined 5b1b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5B1B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5b1b] [5b1b_A] [5b1b_B] [5b1b_C] [5b1b_D] [5b1b_E] [5b1b_F] [5b1b_G] [5b1b_H] [5b1b_I] [5b1b_J] [5b1b_K] [5b1b_L] [5b1b_M] [5b1b_N] [5b1b_O] [5b1b_P] [5b1b_Q] [5b1b_R] [5b1b_S] [5b1b_T] [5b1b_U] [5b1b_V] [5b1b_W] [5b1b_X] [5b1b_Y] [5b1b_Z]
  • SWISS-PROT database:

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