5B1X date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, MAN, NAG enzyme
Primary referenceCrystal structure of human dendritic cell inhibitory receptor C-type lectin domain reveals the binding mode with N-glycan., Nagae M, Ikeda A, Hanashima S, Kojima T, Matsumoto N, Yamamoto K, Yamaguchi Y, FEBS Lett. 2016 Apr;590(8):1280-8. doi: 10.1002/1873-3468.12162. Epub 2016 Apr 6. PMID:27015765
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (5b1x.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (5b1x.pdb2.gz) 22 Kb
  • Biological Unit Coordinates (5b1x.pdb3.gz) 22 Kb
  • Biological Unit Coordinates (5b1x.pdb4.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 5B1X
  • CSU: Contacts of Structural Units for 5B1X
  • Structure Factors (284 Kb)
  • Retrieve 5B1X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5B1X from S2C, [Save to disk]
  • Re-refined 5b1x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5B1X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5b1x] [5b1x_A] [5b1x_B] [5b1x_C] [5b1x_D]
  • SWISS-PROT database:
  • Domain found in 5B1X: [CLECT ] by SMART

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