5B24 | Structural Protein Dna | date | Dec 31, 2015 |
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title | The Crystal Structure Of The Nucleosome Containing Cyclobuta Pyrimidine Dimer | ||||||||||||||||||||||
authors | N.Horikoshi, H.Tachiwana, W.Kagawa, A.Osakabe, H.Kurumizaka | ||||||||||||||||||||||
compound | source | ||||||||||||||||||||||
Molecule: Histone H3.1 Chain: A, E Synonym: Histone H3a,Histone H3b,Histone H3c,Histone H3 H3f,Histone H3h,Histone H3i,Histone H3j,Histone H3k,Hi H3l; Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h3a, H3fa, Hist1h3b, H3fl, Hist1h3c, H3fc, Hist1 H3fb, Hist1h3e, H3fd, Hist1h3f, H3fi, Hist1h3g, H3fh, Hist1 H3fk, Hist1h3i, H3ff, Hist1h3j, H3fj; Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Ph3.1 | ||||||||||||||||||||||
Molecule: Histone H4 Chain: B, F Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h4a, H4a, H4fa, Hist1h4b, H4i, H4fi, Hist1h4c, H4fg, Hist1h4d, H4b, H4fb, Hist1h4e, H4j, H4fj, Hist1h4f, H4fc, Hist1h4h, H4h, H4fh, Hist1h4i, H4m, H4fm, Hist1h4j, H4fe, Hist1h4k, H4d, H4fd, Hist1h4l, H4k, H4fk, Hist2h4a, H4f2, H4fn, Hist2h4, Hist2h4b, H4o, H4fo, Hist4h4; Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm109 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b | ||||||||||||||||||||||
Molecule: Histone H2a Type 1-Be Chain: C, G Synonym: Histone H2a.2,Histone H2aa,Histone H2am Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h2ab, H2afm, Hist1h2ae, H2afa Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Ph2a | ||||||||||||||||||||||
Molecule: Histone H2b Type 1-J Chain: D, H Synonym: Histone H2b.1,Histone H2b.R,H2br Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h2bj, H2bfr Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Ph2b | ||||||||||||||||||||||
Molecule: Dna (145-Mer) Chain: I, J Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh5alpha Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgem-T Easy | ||||||||||||||||||||||
symmetry | Space Group: P 21 21 21 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.60 Å | ||||||||||||||||||||
ligand | TTD | enzyme |
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Gene Ontology |
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Primary reference | Crystal structure of the nucleosome containing ultraviolet light-induced cyclobutane pyrimidine dimer., Horikoshi N, Tachiwana H, Kagawa W, Osakabe A, Matsumoto S, Iwai S, Sugasawa K, Kurumizaka H, Biochem Biophys Res Commun. 2016 Feb 26;471(1):117-22. doi:, 10.1016/j.bbrc.2016.01.170. Epub 2016 Feb 2. PMID:26837048 |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |