5B6C	Hydrolase Protein Binding	date	May 26, 2016
title	Structural Details Of Ufd1 Binding To P97
authors	L.T.M.Le, J.K.Yang
compound		source
Molecule: Transitional Endoplasmic Reticulum Atpase Chain: A Fragment: Unp Residues 21-191 Synonym: Ter Atpase,15s Mg(2+)-Atpase P97 Subunit,Valosin-C Protein,Vcp; Ec: 3.6.4.6 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Vcp Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid
Molecule: Peptide From Ubiquitin Fusion Degradation Protein Homolog; Chain: B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ufd1l Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid
symmetry	Space Group: H 3	R_factor 0.158 R_Free 0.200
crystal cell	length a length b length c angle alpha angle beta angle gamma 107.270 107.270 44.040 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.55 Å
ligand		enzyme	Hydrolase E.C.3.6.4.6 BRENDA
Primary reference	Structural Details of Ufd1 Binding to p97 and Their Functional Implications in ER-Associated Degradation., Le LT, Kang W, Kim JY, Le OT, Lee SY, Yang JK, PLoS One. 2016 Sep 29;11(9):e0163394. doi: 10.1371/journal.pone.0163394., eCollection 2016. PMID:27684549

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk] Biological Unit Coordinates (5b6c.pdb1.gz) 34 Kb CSU: Contacts of Structural Units for 5B6C Structure Factors (567 Kb) Retrieve 5B6C in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5B6C from S2C, [Save to disk] Re-refined 5b6c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5b6c_A] [5b6c] [5b6c_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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