OCA Atlas for 5BMG

5BMG

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MTN, TRS

enzyme

Gene
Ontology

Chain	Function	Process	Component
G, H, D, C, A, B, F, E

Primary reference

Rotameric preferences of a protein spin label at edge-strand beta-sheet sites., Cunningham TF, Pornsuwan S, Horne WS, Saxena S, Protein Sci. 2016 May;25(5):1049-60. doi: 10.1002/pro.2918. Epub 2016 Mar 21. PMID:26948069

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]

Biological Unit Coordinates (5bmg.pdb1.gz) 11 Kb

Biological Unit Coordinates (5bmg.pdb2.gz) 11 Kb

Biological Unit Coordinates (5bmg.pdb3.gz) 11 Kb

Biological Unit Coordinates (5bmg.pdb4.gz) 11 Kb

Biological Unit Coordinates (5bmg.pdb5.gz) 11 Kb

Biological Unit Coordinates (5bmg.pdb6.gz) 11 Kb

Biological Unit Coordinates (5bmg.pdb7.gz) 11 Kb

Biological Unit Coordinates (5bmg.pdb8.gz) 11 Kb

LPC: Ligand-Protein Contacts for 5BMG

CSU: Contacts of Structural Units for 5BMG

Structure Factors (412 Kb)

Retrieve 5BMG in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5BMG from S2C, [Save to disk]

Re-refined 5bmg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5BMG in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5bmg] [5bmg_A] [5bmg_B] [5bmg_C] [5bmg_D] [5bmg_E] [5bmg_F] [5bmg_G] [5bmg_H]

SWISS-PROT database:

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